[EMBOSS] edialign does not take [Start:End] notation into account

Charles Plessy charles-listes-emboss at plessy.org
Sun May 6 11:09:37 UTC 2007


Dear EMBOSS developpers,

I am using edialign with a listfile storing sequences in USA format, such
as:

SeqA.fasta[1:150]
SeqB.fasta[1:150]

However, edialign uses the full sequence, ignoring the [start:end]
range. I think that this is a bug, since emma is able to correctly run
clustalw with listfiles using [start:end] ranges.

Have a nice day,

-- 
Charles Plessy
http://charles.plessy.org
Wako, Saitama, Japan



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