[EMBOSS] Command line with --firstonly

[Peter Rice]

Niels Larsen wrote:
> Have I overlooked a way to switch fasta output to sequence-as
> -single-line mode? I think it allowed by fasta format, and
> if I/we were to build a processing pipe with sequence flowing,
> then I imagine that would be useful both for speed and I/O
> simplicity ..

-ossingle

It has the drawback that you have to accept the default file names for 
the extra output files.

We recommend runninng in an empty directory so you can find all the output.

regards,

Peter