[EMBOSS] extracting 3' UTRs

[Jon Ison]

Hi Shrish

So far as I know, not directly, but it's easily done using a combination
of e.g. coderet, getorf, plotorf and seqret.

Should be obvious from the documentation, e.g.
http://emboss.sourceforge.net/apps/cvs/index.html
http://emboss.sourceforge.net/docs/emboss_tutorial/node4.html

If you envisage a single tool for your task, please let us know to
emboss-bug at emboss.open-bio.org please)

Cheers

Jon




> Hi!
> Is there a way to extract 3' UTRs using EMBOSS programs?
> Shrish
> Dr. Shrish Tiwari
> E503, Centre for Cellular and Molecular Biology
> Uppal Road, Hyderabad - 500 007, INDIA
> Phone: 91-40-27192777
> Alternate email: shrish.geo at yahoo.com
> _______________________________________________
> EMBOSS mailing list
> EMBOSS at lists.open-bio.org
> http://lists.open-bio.org/mailman/listinfo/emboss
>