[EMBOSS] EMBOSS database queries

Michael Thon mike.thon at gmail.com
Wed Dec 12 10:24:34 UTC 2007


I am setting up a database from Genbank formatted files.  I understand  
how to index the db and configure the emboss.default file but I don't  
know how to construct the queries.  queries for sequence IDs are  
pretty simple, i.e. with a USA of the format "dbname:id".  But, how to  
I create a query for the other fields, such as org and key?  Also, do  
these fields support wildcards or substring matches or other fancy  
stuff?
cheers
Mike



More information about the EMBOSS mailing list