[EMBOSS] EMBOSS EXPLORER installation help. .

[Ryan Golhar]

Sounds like something is wrong with your cgi handler.  Are you able to
execute any cgi scripts in cgi-bin?  If not, can you include a copy of
your httpd.conf file and the error from /var/log/httpd/error_log?


> -----Original Message-----
> From: Mukatira, Suraj [mailto:Suraj.Mukatira at stjude.org] 
> Sent: Monday, September 18, 2006 5:43 PM
> To: golharam at umdnj.edu
> Cc: emboss at emboss.open-bio.org
> Subject: RE: [EMBOSS] EMBOSS EXPLORER installation help. .
> 
> 
> 
> No.
> 
> http://10.1.6.145/cgi-bin/emboss/
> 
> Not Found
> The requested URL /cgi-bin/emboss/ was not found on this server.
> 
> -----Original Message-----
> From: Ryan Golhar [mailto:golharam at umdnj.edu] 
> Sent: Monday, September 18, 2006 4:42 PM
> To: Mukatira, Suraj
> Cc: emboss at emboss.open-bio.org
> Subject: RE: [EMBOSS] EMBOSS EXPLORER installation help. .
> 
> Where there any errors from the install script you ran?  
> 
> Are you able to see your main page?  
> http://<servername>/cgi-bin/emboss?
> 
> 
> 
> > -----Original Message-----
> > From: emboss-bounces at lists.open-bio.org
> > [mailto:emboss-bounces at lists.open-bio.org] On Behalf Of 
> > Mukatira, Suraj
> > Sent: Monday, September 18, 2006 3:54 PM
> > To: emboss at emboss.open-bio.org
> > Subject: [EMBOSS] EMBOSS EXPLORER installation help
> > 
> > 
> > Hi all,
> > I have questions regarding emboss explorer installation.
> > Attached is the explorer configuration file
> > 
> > I have emboss4.0 running in my linux machine: /usr/local/bin
> > and /var/www/emboss
> > 
> > After following instructions on the emboss explorer
> > installation I cannot see the webpage: Not Found The 
> > requested URL /cgi-bin/emboss/intro was not found on this server.
> > 
> > Not Found
> > The requested URL /cgi-bin/emboss/menu was not found on this server
> > 
> > Here are some directory structures:
> > 
> > drwxrwxr-x  2 mukatira mukatira   4096 2006-09-15 14:02 cgi-bin
> > drwxr-xr-x  6 mukatira mukatira   4096 2006-09-18 13:58 emboss
> > drwxrwxr-x  3 mukatira mukatira   4096 2006-09-15 14:02 html
> > -rw-r--r--  1 mukatira mukatira   1457 2006-09-11 14:28 index.html
> > $>:/var/www$ pwd
> > /var/www
> > 
> > Under cgi-bin I do not see a folder 'emboss'
> > 
> > $>/var/www/cgi-bin$ ls -l
> > -rwxrwxr-x 1 root root 110 2006-09-18 14:34 emboss
> > $>:/var/www/cgi-bin$ more emboss #!/usr/bin/perl
> > 
> > use strict;
> > use warnings;
> > 
> > use EMBOSS::GUI;
> > 
> > my $emboss = EMBOSS::GUI->new();
> > $emboss->go();
> > 
> > 
> > 
> > 
> > Thanks in anticipation.
> > Also, what is the best way to completely uninstall emboss.
> > 
> 
>