[EMBOSS] EMBOSS-Explorer Follow-up

[Ryan Golhar]

Yes, I tried that, but it doesn't work for EMBASSY applications as they
fall in /usr/share/EMBOSS/doc/html/embassy/apps/...

> -----Original Message-----
> From: Mao, Jean (NIH/CIT) [E] [mailto:maoj at mail.nih.gov] 
> Sent: Monday, September 11, 2006 2:28 PM
> To: golharam at umdnj.edu
> Cc: emboss at emboss.open-bio.org
> Subject: RE: [EMBOSS] EMBOSS-Explorer Follow-up
> 
> 
> Have you tried to modify the Conf.pm page? It's under our 
> /usr/local/perl-5.8.7/lib/site_perl/5.8.7/EMBOSS/GUI/Conf.pm 
> and just modify the line to the right directory for the 
> manual html pages. I did and it worked. Luke's email is  
> 'mccarthy at users.sourceforge.net'
> 
> -----Original Message-----
> From: Ryan Golhar [mailto:golharam at umdnj.edu] 
> Sent: Monday, September 11, 2006 1:12 PM
> To: 'Peter Rice'
> Cc: emboss at emboss.open-bio.org
> Subject: Re: [EMBOSS] EMBOSS-Explorer Follow-up
> 
> Okay thanks.  Then I think maybe EMBOSS-Explorer should do a 
> 'tfm -html <appname>'.  That would make it independent of the 
> EMBOSS version and rely on tfm to generate the html 
> documentation.  I'll play around with that change.  Do you 
> know how to get a hold of Luke btw?
> 
> Ryan
> 
> 
> > -----Original Message-----
> > From: Peter Rice [mailto:pmr at ebi.ac.uk]
> > Sent: Monday, September 11, 2006 1:02 PM
> > To: golharam at umdnj.edu
> > Cc: emboss at emboss.open-bio.org
> > Subject: Re: [EMBOSS] EMBOSS-Explorer Follow-up
> > 
> > 
> > Ryan Golhar wrote:
> > > So I stepped through the code for tfm and it looks like it
> > initially
> > > looks in /usr/share/EMBOSS/doc/programs/html.  So 'make 
> install' is
> > > putting the html docs in
> > /usr/share/EMBOSS/doc/html/emboss/apps/...
> > > But why?  Was this an inadvertant change?
> > 
> > Oops. usr/share/EMBOSS/doc/html/emboss/apps/ is the new location in
> > 4.0.0 (so we do not have to keep copies of all the EMBASSY 
> application 
> > documentation in the EMBOSS source).
> > 
> > Will be fixed in 4.0.0. A simple copy is one way to fix it. I will
> > make a fix for tfm.
> > 
> > regards,
> > 
> > Peter
> > 
> 
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