[EMBOSS] (no subject)
simon.andrews at bbsrc.ac.uk
Thu Aug 31 10:48:56 UTC 2006
On 29 Aug 2006, at 12:37, Shrish Tiwari wrote:
> Is there a program in EMBOSS to extract the coordinates of exons?
It depends what you mean.
If you want to extract the transcript sequence from a genomic
sequence with an mRNA feature defined in its header then you can use
If you want to figure out where the exon positions are in a sequence
and you have an mRNA and a genomic sequence then you can use est2genome.
If you just want to view the header annotation then entret will give
More information about the EMBOSS