[EMBOSS] Problems indexing with dbxfasta
Marc Logghe
Marc.Logghe at DEVGEN.com
Thu Apr 13 09:00:56 UTC 2006
Hi Simon,
> The same files have indexed OK with formatdb. I havent'
> tried with dbifasta as I'm trying to move everything over to
> the new dbx system (and the rest of our databases have
> processed OK with dbx(fasta|flat)).
>
> Anyone have any ideas about how to debug this?
You can run the command with the -debug option (any EMBOSS application
accepts this option). In that case a dbxfasta.dbg file will be created.
Hope this file will give you the clues.
Cheers,
Marc
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