[EMBOSS] dbxflat / dbiflat
Ulrich Bernhard
ulrich.bernhard at id.unizh.ch
Tue Sep 27 06:47:31 UTC 2005
I just started to create the indozes for the whole embl database. I
first tried to create the indizes with dbxflat:
dbxflat -dbname embl -dbresource embl -date 24/09/05 -idformat embl
-release 84.0 -directory /data/raw/embl -indexoutdir /data/emboss/embl
-fields id,acc,sv,key,org -filenames *.dat
But the job runs very very long. As an example, the dbiflat for fun*.dat
tooks about 1:30 Min CPU time - the dbxflat for the same file tooks more
than 20 Min CPU time.
Is that normal?
Thanks for any hint
Ulrich
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