[EMBOSS] dbxflat / dbiflat

Ulrich Bernhard ulrich.bernhard at id.unizh.ch
Tue Sep 27 06:47:31 UTC 2005


I just started to create the indozes for the whole embl database. I 
first tried to create the indizes with dbxflat:
dbxflat -dbname embl -dbresource embl -date 24/09/05 -idformat embl 
-release 84.0 -directory /data/raw/embl -indexoutdir /data/emboss/embl 
-fields id,acc,sv,key,org -filenames *.dat

But the job runs very very long. As an example, the dbiflat for fun*.dat 
tooks about 1:30 Min CPU time - the dbxflat for the same file tooks more 
than 20 Min CPU time.

Is that normal?

Thanks for any hint

Ulrich


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