[EMBOSS] Segmentation fault when doing seqret
Wells, Isabelle
isabelle.wells at roche.com
Thu Oct 13 08:46:48 UTC 2005
Hi,
Are any of the EMBL flat files larger than 2GB? This is a problem when
indexing with dbiflat and was already discussed on this list.
Isabelle
-----Original Message-----
From: emboss-bounces at emboss.open-bio.org
[mailto:emboss-bounces at emboss.open-bio.org] On Behalf Of Enrique de
Andres Saiz
Sent: Thursday, October 13, 2005 10:38
To: emboss at emboss.open-bio.org
Subject: [EMBOSS] Segmentation fault when doing seqret
Hello,
I'm trying to retrieve a sequence from embl using seqret command but I
obtain a segmentation fault error:
$> seqret embl:AC005155
Reads and writes (returns) sequences
Segmentation fault
This doesn't happen with every entry in the database. With another
entries, everything goes well.
I'm using emboss-3.0.0 and EMBL database is indexed using dbiflat.
Does anybody konws what could happen?
Thanks in advance,
Enrique.
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