[EMBOSS] Jemboss launch killing cpu
Michael Leong
leongmz at gmail.com
Sat May 21 07:41:19 UTC 2005
Hi.
I'm trying to setup Jemboss on my lan and trying to use the java webstart
to launch it. However, on the Jemboss login window, when the progress
meter reaches about 50%, it locks up and eats all teh cpu.
Thx,
mike
Here are the steps at I took to install it:
#------------------------------------------------------
untar EMBOSSS 2.10.0
untar tomcat 5.5.9
download emboss install script for tomcat 5.5.x
untar axis 1.2
mkdir /opt/emboss-data/soap
chmod 777 /opt/emboss-data/soap
chmod a+t /opt/emboss-data/soap
replace install script w/ one for tomcat 5.5.x
run ./install-jemboss-server.sh
install options:
client-server
os: linux
ip: 192.168.2.108
ssl: yes
port: 8443
java: jdk v1.5
unix auth: yes
tomcat uid: 1000
auth method: shadow
embassy pkgs: no
clustalw: /usr/bin
primer3_core: <blank>
auto deploy: yes
modifed server.xml as told
got warning about javax.activation.DataHandler and
javax.mail.internet.MimeMultipart not found
chown root /opt/emboss/bin/jembossctl
chmod u+s /opt/emboss/bin/jembossctl
cd /opt/emboss/share/EMBOSS/jemboss/utils
./makeJNLP.sh
edit /opt/emboss/share/EMBOSS/jemboss/jnlp/index.html and Jemboss.jnlp to
proper webserver
copy /opt/emboss/share/EMBOSS/jemboss/jnlp/* to webserver
#------------------------------------------------------
More information about the EMBOSS
mailing list