[EMBOSS] Some question
Dr J.C. Ison
jison at hgmp.mrc.ac.uk
Thu Jul 21 12:10:50 UTC 2005
Dear Balazs
See http://emboss.sourceforge.net/apps/ for application documentation.
transeq Translates nucleic acid sequences. (i.e. DNA -> protein)
backtranseq Back translate a protein sequence (i.e. protein -> DNA)
coderet Extract CDS, mRNA and translations from feature tables
I don't think there is anything to interchange sense/antisense or mRNA / DNA
sequences but something could be written if you let us know exactly what you
need / why you need it.
Cheers
Jon
Kerti Balázs Gábor wrote:
>
> Hello!
>
> There is some (elementary) question, because I do not find - maybe I do wrong
> - the solution.
>
> - how to backtranslate a cds mRNA fragm. to (c)DNA fragm. ?
> - how to generate antisense DNA fragm. from a sens.
>
> Thank you.
>
> Balazs
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--
Jon C. Ison, PhD
Proteomics Applications Group
MRC Rosalind Franklin Centre for Genomics Research
Wellcome Trust Genome Campus, Hinxton, Cambridge, CB10 1SB, UK
Tel: +44 1223 494500 Fax: +44 1223 494512
E-mail: jison at rfcgr.mrc.ac.uk Web: http://www.rfcgr.mrc.ac.uk
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