[EMBOSS] emboss.default

[Alan Bleasby]

>> Oh and any news about the new indexing?
>To be included as a beta version in the next release.

Best not to take that as being definitive. The good news
is that the KW/DE/OS/OC was finished yesterday. The bad
news is that it hasn't been tested yet. The ID/AC/SV code
has been ready for some time but not incorporated.

Delays have been rather unavoidable and unpredictable given
the funding circumstances; they may well continue in that
fashion until matters are resolved.

The next EMBOSS release (2.10.0) may happen soon. That release
will sort out issues to do with alignments, Jemboss (Java 1.5)
etc. The indexing code cannot be incorporated in that
timescale.

Alan