[EMBOSS] emma/clustalw PATH problems

Guy Bottu gbottu at ben.vub.ac.be
Thu Aug 18 15:30:20 UTC 2005


On Thu, Aug 18, 2005 at 02:46:03PM +0000, Anders Nist?r wrote:
> I am trying to run emma, and for certain reasons i don't have clustalw in my
> PATH.

> How about placing the clustalw binary ( I assume that you have compiled
> this separately) into the same directory where you have the emboss
> binaries?

I think the best is to put in the directory with the EMBOSS binaries a 
logical link pointing to clustalw. Note by the way that you also need a 
logical link to primer3_core to make eprimer3 work.

	Guy Bottu,
	Belgian EMBnet Node




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