[EMBOSS] esim4 man page

Peter Rice pmr at ebi.ac.uk
Thu Mar 18 10:06:41 UTC 2004


Stefanie Lager wrote:

> ESIM4 doesn't seem to be able to align multiple mRNA sequences to a
> single genomic sequence, which sim4 as an external program can. In
> version 2.8.0 of emboss ESIM4 alignments don't work (format=3), it finds
> the correct reagion to align, but it seems to "extract" the wrong
> genomic region to make the alignment (it was OK in version 2.6.0 of
> EMBOSS). 

Thanks for pointing that out.

I am working on QA tests for the EMBASSY programs and will put these 
test cases in.

regards,

Peter Rice




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