[EMBOSS] incorporating old code in 2.9.0

[Derek Gatherer]

and the same applies to AjPFloat, ie:

   AjPFloat matrixa;
   AjPFloat matrixb;
   AjPFloat matrixc;
   AjPFloat matrixe;

is necessary.

At 09:56 26/07/2004 +0100, Derek Gatherer wrote:
>At 11:29 23/07/2004 +0100, Peter Rice wrote:
>
>>In cleaning up the code for 2.9.0 we have become strict about defining 
>>"const AjPStr" and "const char*" for read-only parameters.
>
>It seems that AjPFile variable also need to be declared one line at a time 
>too.  Eg:
>
>This compiles okay:
>
>int main (int argc, char **argv)
>{
>    AjPFile fhmatina;  // all AjPFile need own lines for 2.9.0
>    AjPFile fhmatinb;
>    AjPFile fhoutmat;
>    AjPStr  linea;   // all AjPStr need own lines for 2.9.0
>    AjPStr  lineb;
>    AjPStr  elementa;
>    AjPStr  elementb;
>    ajint   i, j, seqsina, seqsinb;
>    float ftmpa, ftmpb, sigmax2=0, sigmax=0, xsigmax2=0, xsigmax=0;
>    float mean, xmean, sdsample, sdpopulation, xsdsample, xsdpopulation;
>    float gbrate;
>    char *ctmp;
>
>but this crashes at make with the same "incompatible types in assignment" 
>error.
>
>int main (int argc, char **argv)
>{
>    AjPFile fhmatina, fhmatinb, fhoutmat;
>    AjPStr  linea;   // all AjPStr need own lines for 2.9.0
>    AjPStr  lineb;
>    AjPStr  elementa;
>    AjPStr  elementb;
>    ajint   i, j, seqsina, seqsinb;
>    float ftmpa, ftmpb, sigmax2=0, sigmax=0, xsigmax2=0, xsigmax=0;
>    float mean, xmean, sdsample, sdpopulation, xsdsample, xsdpopulation;
>    float gbrate;
>    char *ctmp;
>
>I'm still making, so if I find anything else, I'll let you know.  I'm 
>about halfway through make, and so far this is the only additional error.
>
>cheers
>Derek
>_________________________
>
>Derek Gatherer Ph.D. Cert.Ed.
>Computer Officer
>Institute of Virology
>Church St.
>Glasgow G11 5JR
>
>Phone:      +44 141 330 6268
>Fax:          +44 141 337 2236
>Email:        d.gatherer at vir.gla.ac.uk
>Website:    http://www.vir.gla.ac.uk

_________________________

Derek Gatherer Ph.D. Cert.Ed.
Computer Officer
Institute of Virology
Church St.
Glasgow G11 5JR

Phone:      +44 141 330 6268
Fax:          +44 141 337 2236
Email:	      d.gatherer at vir.gla.ac.uk
Website:    http://www.vir.gla.ac.uk