[EMBOSS] infoseq sequence type

[owner-emboss at hgmp.mrc.ac.uk]

David,
It has now been changed so that it checks the type of every input
sequence.
Gary

David.Bauer at SCHERING.DE wrote:
> 
> Hello,
> 
> infoseq seems to have a problem if it reads a fasta file containing NA and
> Protein sequences.
> I originally wanted to use this program to differentiate between the
> sequence types.
> But it seems that infoseq only checks the first sequence in the fasta files
> and assumes the same type for all other sequences.
> So if first sequence is protein, all other are declared as protein even if
> they are nucl. and vice versa.
> Would it be possible to change infoseq so it would do the type check for
> each sequence in a multiple sequence file ?
> 
> Thanks,
> David.

-- 
Gary Williams               Tel: +44 1223 494522  Fax: +44 1223 494512
mailto:G.Williams at hgmp.mrc.ac.uk          http://www.hgmp.mrc.ac.uk/
Bioinformatics, MRC HGMP, Hinxton, Cambridge, CB10 1SB, UK