[EMBOSS] infoseq sequence type

David.Bauer at SCHERING.DE David.Bauer at SCHERING.DE
Mon Sep 1 11:20:08 UTC 2003


Hello,

infoseq seems to have a problem if it reads a fasta file containing NA and
Protein sequences.
I originally wanted to use this program to differentiate between the
sequence types.
But it seems that infoseq only checks the first sequence in the fasta files
and assumes the same type for all other sequences.
So if first sequence is protein, all other are declared as protein even if
they are nucl. and vice versa.
Would it be possible to change infoseq so it would do the type check for
each sequence in a multiple sequence file ?

Thanks,
David.





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