Problems with dbigcg...

[Stephan.Hurling at evotecoai.com]

Hello Everyone,

I would like to use EMBOSS version 2.6.0 together with the GCG Wisconsin 
package version 10.3
on a Red Hat 7.2 linux server. I followed the installation instructions 
from the administrators guide
and doing the usual

./configure
make 
make install

I compiled and installed emboss on my system without any error messages. 
But when I want to make
indexes from a gcg database I run into troubles. See the following output 
of an interactive session:

14:18 [root at kepler] ~/Temp # dbigcg
Index a GCG formatted database
      EMBL : EMBL
     SWISS : Swiss-Prot, SpTrEMBL, TrEMBLnew
   GENBANK : Genbank, DDBJ
       PIR : NBRF
Entry format [EMBL]:
Database directory [.]: /usr/local/share/EMBOSS/data/GCG_DATABASES/gcgembl
Wildcard database filename [*.seq]:
Database name: embl
Release number [0.0]: 73.0
Index date [00/00/00]: 01/12/02

   EMBOSS An error in embdbi.c at line 590:
Cannot open embl.idsrt for reading

14:21 [root at kepler] ~/Temp # ll
total 252k
drwxr-xr-x    2 root     root         4.0k May  8 14:18 ./
drwxr-x---   24 root     root         4.0k May  8 14:15 ../
-rw-------    1 root     root         1.4M May  8 14:18 core
-rw-r--r--    1 root     root         1.5k May  8 14:18 division.lkp
-rw-r--r--    1 root     root          675 May  8 14:18 embl001.acnum
-rw-r--r--    1 root     root          104 May  8 14:18 embl002.acnum
-rw-r--r--    1 root     root          504 May  8 14:18 embl003.acnum
-rw-r--r--    1 root     root           51 May  8 14:18 embl004.acnum
-rw-r--r--    1 root     root            0 May  8 14:18 embl005.acnum
-rw-r--r--    1 root     root            0 May  8 14:18 embl006.acnum
-rw-r--r--    1 root     root            0 May  8 14:18 embl007.acnum
-rw-r--r--    1 root     root          126 May  8 14:18 embl008.acnum
-rw-r--r--    1 root     root            0 May  8 14:18 embl009.acnum
-rw-r--r--    1 root     root            0 May  8 14:18 embl010.acnum
-rw-r--r--    1 root     root            0 May  8 14:18 embl011.acnum
-rw-r--r--    1 root     root            0 May  8 14:18 embl012.acnum
-rw-r--r--    1 root     root           36 May  8 14:18 embl013.acnum
-rw-r--r--    1 root     root          25k May  8 14:18 embl014.acnum
-rw-r--r--    1 root     root          161 May  8 14:18 embl015.acnum
-rw-r--r--    1 root     root          850 May  8 14:18 embl016.acnum
-rw-r--r--    1 root     root         1.3k May  8 14:18 embl017.acnum
-rw-r--r--    1 root     root         2.6k May  8 14:18 embl018.acnum
-rw-r--r--    1 root     root          121 May  8 14:18 embl019.acnum
-rw-r--r--    1 root     root          290 May  8 14:18 embl020.acnum
-rw-r--r--    1 root     root            0 May  8 14:18 embl021.acnum
-rw-r--r--    1 root     root          104 May  8 14:18 embl022.acnum
-rw-r--r--    1 root     root          188 May  8 14:18 embl023.acnum
-rw-r--r--    1 root     root            0 May  8 14:18 embl024.acnum
-rw-r--r--    1 root     root           34 May  8 14:18 embl025.acnum
-rw-r--r--    1 root     root           14 May  8 14:18 embl026.acnum
-rw-r--r--    1 root     root          490 May  8 14:18 embl027.acnum
-rw-r--r--    1 root     root          300 May  8 14:18 entrynam.idx
-rw-------    1 root     root            0 May  8 14:18 sort9YCQfK

Can somebody help me? Have I done something wrong during the compilation 
step of emboss?
Any hint would help me.

Thanks in advance...

All the best,


Stephan
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