specifying octanol output filename

Wiepert, Mathieu Wiepert.Mathieu at mayo.edu
Mon Mar 17 21:57:37 UTC 2003


Is there a way to redirect octanol output to a filename of my choosing?  I looked through the Command line docs but couldn't find anything.  I thought there was a global option like -output or -outfile, but I can't seem to get anything to work with octanol.  All output is named octanol.1.png (used -graph png option).  Simple enough to add a second line of code to rename the file, but seems different than the other programs I have used so far.

While I am at it, I have one file with many sequences, in fasta format.  Can octanol create output for all the sequences with one call?  I can easily get around this as well, but many programs seem to take files with many sequences, thought I would ask.



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