[EMBOSS] remap and GCG mapplot

[Jean-Christophe AME]

Thanks for the information. I wrote to him to ask him TACG version 4 
which I think will very likely also solve my problems.
Jean-Christophe


Le 4 déc. 03, à 07:17, Stefanie Lager a écrit :

> I don't know anything about MacOSX, but when I had problems with TACG
> on Linux Harry Mangalam sent me the latest TACG version 4.0, which
> solved my compilation problems.
>
> Stefanie
>
>> It looks good, but I tried to compiled it with MacOSX 10.3 and I
>> got a lot of errors...
>>
>> Le 3 déc. 03, à 14:08, Stefanie Lager a écrit :
>>
>>> The program TACG ( http://tacg.sourceforge.net/) can substitute
>>> for some of the GCG applications missing in EMBOSS. Like
>>>
>>> mapplot (tacg -l -s )
>>> map (tacg -T3,1 -sL )
>>> mapsort (tacg -cF2 )
>>> mapgel (tacg -g10 -s )
>>> findpatterns (tacg -S2 -R 'path/to/a/pattern/file )
>>>
>>> Stefanie
>>>
>>>> Hello,
>>>>
>>>> I am writing for a request for emboss. It would be great that
>>>> emboss could integrate something similar to the very useful (my
>>>> point of view) GCG's program MAPPLOT (a graphical representation
>>>> of a restriction map). I am sure that could be easily added to
>>>> emboss's remap or restrict.
>>>> With this feature added I would definitively not use anymore
>>>> GCG. Any idea. Thanks for the great job.
>>>> Jean-Christophe
>>>>
>>>> ________________________
>>>> Jean-Christophe Amé, PhD
>>>> U.P.R. 9003 du CNRS - Cancérogénèse et Mutagénèse Moléculaire et
>>>> Structurale
>>>> École Supérieure de Biotechnologie de Strasbourg
>>>> Pôle API
>>>> Parc d'innovation, Boulevard Sébastien Brant
>>>> BP 10413
>>>> 67412 ILLKIRCH CEDEX
>>>> France
>>>>
>>>> tel.: 33 3 90 24 47 05
>>>> Fax.: 33 3 90 24 46 86
>>>
>>> _________________________________________________________________
>>> http://fastmail.ca/ - Fast Secure Web Email for Canadians
>> ________________________
>> Jean-Christophe Amé, PhD
>> U.P.R. 9003 du CNRS - Cancérogénèse et Mutagénèse Moléculaire et
>> Structurale
>> École Supérieure de Biotechnologie de Strasbourg
>> Pôle API
>> Parc d'innovation, Boulevard Sébastien Brant
>> BP 10413
>> 67412 ILLKIRCH CEDEX
>> France
>>
>> tel.: 33 3 90 24 47 05
>> Fax.: 33 3 90 24 46 86
>
> _________________________________________________________________
>     http://fastmail.ca/ - Fast Secure Web Email for Canadians
________________________
Jean-Christophe Amé, PhD
U.P.R. 9003 du CNRS - Cancérogénèse et Mutagénèse Moléculaire et 
Structurale
École Supérieure de Biotechnologie de Strasbourg
Pôle API
Parc d'innovation, Boulevard Sébastien Brant
BP 10413
67412 ILLKIRCH CEDEX
France

tel.: 33 3 90 24 47 05
Fax.: 33 3 90 24 46 86

http://parplink.u-strasbg.fr
http://www-esbs.u-strasbg.fr/centrerech/upr9003/upr9003.html
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