[EMBOSS] remap and GCG mapplot

Jean-Christophe AME ame at esbs.u-strasbg.fr
Wed Dec 3 15:22:07 UTC 2003


It looks good, but I tried to compiled it with MacOSX 10.3 and I got a 
lot of errors...

Le 3 déc. 03, à 14:08, Stefanie Lager a écrit :

> The program TACG ( http://tacg.sourceforge.net/) can substitute for
> some of the GCG applications missing in EMBOSS. Like
>
> mapplot (tacg -l -s )
> map (tacg -T3,1 -sL )
> mapsort (tacg -cF2 )
> mapgel (tacg -g10 -s )
> findpatterns (tacg -S2 -R 'path/to/a/pattern/file )
>
> Stefanie
>
>> Hello,
>>
>> I am writing for a request for emboss. It would be great that
>> emboss could integrate something similar to the very useful (my
>> point of view) GCG's program MAPPLOT (a graphical representation
>> of a restriction map). I am sure that could be easily added to
>> emboss's remap or restrict.
>> With this feature added I would definitively not use anymore GCG.
>> Any idea. Thanks for the great job.
>> Jean-Christophe
>>
>> ________________________
>> Jean-Christophe Amé, PhD
>> U.P.R. 9003 du CNRS - Cancérogénèse et Mutagénèse Moléculaire et
>> Structurale
>> École Supérieure de Biotechnologie de Strasbourg
>> Pôle API
>> Parc d'innovation, Boulevard Sébastien Brant
>> BP 10413
>> 67412 ILLKIRCH CEDEX
>> France
>>
>> tel.: 33 3 90 24 47 05
>> Fax.: 33 3 90 24 46 86
>
> _________________________________________________________________
>     http://fastmail.ca/ - Fast Secure Web Email for Canadians
________________________
Jean-Christophe Amé, PhD
U.P.R. 9003 du CNRS - Cancérogénèse et Mutagénèse Moléculaire et 
Structurale
École Supérieure de Biotechnologie de Strasbourg
Pôle API
Parc d'innovation, Boulevard Sébastien Brant
BP 10413
67412 ILLKIRCH CEDEX
France

tel.: 33 3 90 24 47 05
Fax.: 33 3 90 24 46 86

http://parplink.u-strasbg.fr
http://www-esbs.u-strasbg.fr/centrerech/upr9003/upr9003.html
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