[EMBOSS] cirdna problem on macosx

Peter Rice pmr at ebi.ac.uk
Tue Dec 2 12:06:37 UTC 2003


fr chalaoux wrote:

> Hi all,
> 
> As noted in  
> http://www.mail-archive.com/fink-devel@lists.sourceforge.net/ 
> msg06607.html , I confirm the problem.
> 
> It even subsists in EMBOSS 2.8.0 ...

cirdna and lindna have some fixed array sizes which need fixing for some 
systems (and, as it happens, for valgrind memory tests).

Non-urgent (cirdna and lindna are not, as faras I am aware, highly 
used), so to be fixed in a future release... but quite soon.

As a quick fix, you can reduce MAXLABELS and perhaps MAXGROUPS in 
cirdna.c and lindna.c

Hope that helps,

Peter Rice





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