blast or fasta with emboss

David Martin d.m.a.martin at
Wed Apr 30 10:24:34 UTC 2003

On 30/4/03 11:20 am, "arun anirudhan" <arunanirudhan at> wrote:

> Hello
> I have downloaded all the databases locally to my
> server. Is there any emboss progarm by which we can do
> a blast or fasta search to the databases installed in
> my server with a sequence in a text file.

You will have to install the BLAST or FASTA software separately.

EMBOSS can help in providing the right formats, but doesn't incorporate
these packages directly.


> With regards
> Arun
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David Martin PhD
Bioinformatics Scientific Officer
Post-Genomics and Molecular Interactions Centre
University of Dundee

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