this format is not readable by seqret

[Peter Rice]

Joerg Muehlisch wrote:

> Some of my files are not readable and I do not know the name of their
> format:
> 
> Contig 1 (1,506)
>   Contig Length:                  506 bases
>   Average Length/Sequence:        458 bases
>   Total Sequence Length:         1375 bases
>   Top Strand:                       3 sequences
>   Bottom Strand:                    0 sequences
>   Total:                            3 sequences
> ^^
> AAMSCWATAGGGCGAATTGGAGCTCCACCGCGGTGGCGGYCGC...
> 
> May be there is a way to change this format in an apropriate way. 

Should be possible, if the format is common enough.

Where does the file come from? Does this program/package have an option to 
save in one of the (many) 'standard' formats?

regards,

Peter Rice

-- 
------------------------------------------------
Peter Rice, LION Bioscience Ltd, Cambridge, UK
peter.rice at uk.lionbioscience.com +44 1223 224723