Suggestion for new use for EMBOSS program

Charles Plessy charles at
Thu Nov 7 13:20:42 UTC 2002

> The best replacement I've found is the EMBOSS program tfscan!

> Obviously, I could write a script to wrap tfscan but I'd like to
> avoid this.  A new program with this functionality would be beneficial
> for the EMBOSS package.

An alternative would be to write a script that builds a
transfac-format database from a flatfile containing names and
corresponding consensus (This would also allow to migrate the
pattern.dat file of GCG).


More information about the EMBOSS mailing list