comparing randomized sequences

Guy Bottu gbottu at ben.vub.ac.be
Mon Dec 2 09:48:02 UTC 2002


from : Belgian EMBnet Node

	Dear student,
	
You can run the program shuffleseq with parameter -shuffle=n on sequence B to 
obtain n randomized versions. Then you can run needle or water on sequence A and 
the shuffleseq output. (or some variation of this scheme).

	Guy Bottu



More information about the EMBOSS mailing list