Where is protml (Phylip) ?
Frank Wright
frank at bioss.ac.uk
Tue Apr 9 10:04:18 UTC 2002
PHYLIP 3.5 includes PROTML (from the MOLPHY package) because v 3.5 does
not have a protein maximum likelihood program.
However, PHYLIP 3.6 (almost about to go to a Beta release) has a new
program, PROML, which is a PHYLIP protein maximum likelihood program.
PROML has additional features to PROTML.
I suggest waiting for PHYLIP 3.6 to be released and EMBOSS/EMBASSY is
adapted to access v 3.6 programs. In the meantime, PHYLIP 3.6 (alpha
version, but pretty stable) is available from
http://evolution.genetics.washington.edu/phylip.html.
Best Wishes,
Frank
--
Frank Wright
Biomathematics and Statistics Scotland,
SCRI, DUNDEE DD2 5DA, Scotland
frank at bioss.sari.ac.uk
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