Where is protml (Phylip) ?
Carlos Quijano
cquijano at iib.uam.es
Tue Apr 9 08:51:30 UTC 2002
Hello,
Some people asked me about "activating" the protml application from
phylip package. ;-)
We use Emboss, with Embassy, and it seems that protml is documented but
not compiled or installed. Even looking for it under ./src it is not
present by some reason.
I don't know if the cause for it is that protml (something like dnaml
but for proteins trees) has been developed with PASCAL instead of C.
With the phylip package (not Embasy's) protml.pas is present between the
other sourcefiles. And I have seen that it comes with the MOLPHY package
too, but in C, I guess.
Someone has any idea for put a compiled protml.pas (or molphy's) into
Emboss and make it accesible for the frontend-app used (for me w2h)??
I know perhaps this solution is not the best one, or perhaps a little
paranoid. Because it's possible to use PIE like web interface for
Phylip, Molphi's protml and puzzle.
I am only looking for an easy way for compiling protml and make it part
of the Emboss or Emboss/w2h applications set.
Thank you for your time.
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