primer3 and qual scores

David Mathog mathog at mendel.bio.caltech.edu
Tue Apr 2 16:39:48 UTC 2002


The 0.9 version of primer3 from 

http://www-genome.wi.mit.edu/genome_software/other/primer3.html

comes with a cgi script that puts up a web interface which
drives primer3_core.  That web interface provides a slew
of options for including qual values in a section labeled
"Sequence Quality".  The primer3 program in EMBOSS seems not to
have these options.   Is there some technical reason why this
functionality wasn't included or is it just one of those (many) things
that have yet to percolate to the top of the "to do" list?

Thanks,

David Mathog
mathog at caltech.edu
Manager, Sequence Analysis Facility, Biology Division, Caltech




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