Protein Clustering tool

[Dr J.C. Ison]

Software to cluster protein sequences into families on
the basis of relatedness of sequence is on my list of
jobs to do - will happen within the next 3 months.

I personally need something quite simple minded, if
you have any specific requirements let me know and
I can try and pull it in my design.

Cheers

J.

Farid Chetouani wrote:

> Bonjour
>
> I would like to know,
> if there is plan in Emboss to develop
> a software to cluster protein into families (of paralogues/orthologues)
> according to the sequence similarity
>
> thank you for your help
>
> F
>
> PS: please reply to my email fchetou at infobiogen.fr

--
Jon C. Ison, PhD
Bioinformatics Applications Group
UK MRC Human Genome Mapping Project Resource Centre
Hinxton, Cambridge, CB10 1SB, UK
E-mail : jison at hgmp.mrc.ac.uk
Tel    : 01223 49-4548
HGMP-RC: http://www.hgmp.mrc.ac.uk/
EMBOSS : http://www.hgmp.mrc.ac.uk/Software/EMBOSS/
CCP11  : http://www.hgmp.mrc.ac.uk/CCP11/