Pattern lists and fuzz(nuc|pro|tran) and [pd]reg

Peter Rice pmr at
Wed Jun 16 10:38:19 UTC 2004

Henrikki Almusa wrote:

> Acd would need propably new file type, patlist. It should be defined in the 
> programs acd file, whether the pattern is regex or prosite. This would allow 
> the reading (and compiling the patterns) in acd command.

... or we can define a knowntype attribute for the string that says the 
program will accept a pattern (of some kind) or an @file. That avoids 
defining a new ACD type, but can still be used in GUIs and web 
service/workflow wrappers to validate the pattern.


Peter Rice

More information about the emboss-dev mailing list