Preferred isischizomer (bis)

Guy Bottu gbottu at black.vub.ac.be
Tue Apr 15 18:54:31 UTC 2003


from : BEN

	Dear colleagues,

Allow me to insist. The point is that when you ask for only one
representative isoschizomer the programs should report PstI, because
PstI is mentioned in Rebase as the "prototype". The GCG programs map,
mapplot and mapsort did do this. The file in GCG format contains :
;BstMAI    5 C_TGCA'G      -4 
PstI       5 C_TGCA'G      -4
While withrefm contains the same information in another way.
So, IMHO, rebaseextract and/or restrict+remap are not doing their job
properly.

	Sincerely,
	Guy Bottu



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