[DAS] RELAX NG schema for "sequence" command
Andrew Roberts
aroberts at broadinstitute.org
Tue Mar 1 15:19:13 UTC 2011
Alright, now I'm hitting the lack of support for ERRORSEGMENT within
the sequence command response. I think there needs to be a choice
inside the oneOrMore, so that elements can be SEQUENCE or
ERRORSEGMENT. I attached what I'm using as a testing schema in the
meantime, hopefully it's helpful.
Andrew
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On Mar 1, 2011, at 5:09 AM, Jonathan Warren wrote:
> This is fixed now.
>
> On 28 Feb 2011, at 18:34, Andrew Roberts wrote:
>
>> Hello,
>>
>> I'm working on some validations, and I think I may have found an
>> error in sequence.rng (www.dasregistry.org/validation1.6/sequence.rng)
>> . It appears that this schema makes no provision for the actual
>> text data that belongs to the sequence element (i.e. the bases
>> themselves). Is this a known issue?
>>
>> If not, I think the solution is to add a <text/> element inside
>> the sequence element. Line 10 should read,
>>
>> <attribute name="start"><data type="integer"></data></
>> attribute><attribute name="stop"><data type="integer"></data></
>> attribute><optional><attribute name="version"><text></text></
>> attribute></optional><optional><attribute name="label"><text></
>> text></attribute></optional><text/></element>
>>
>> Cheers,
>>
>> Andrew
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>
> Jonathan Warren
> Senior Developer and DAS coordinator
> blog: http://biodasman.wordpress.com/
> jw12 at sanger.ac.uk
> Ext: 2314
> Telephone: 01223 492314
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