[DAS] Dazzle with Ensembl 3.26.1
jfreeman
jfreeman@variagenics.com
Thu, 14 Feb 2002 18:00:36 -0500
Hi Thomas,
The:
http://www.biojava.org/download/ensembl-das/
website as of 2/14/2002, 18:00 EST -0600 seems to be down, (or just
overloaded :))
Thank you very much for this,
Jim Freeman
Thomas Down wrote:
>
> On Thu, Feb 14, 2002 at 06:10:45PM -0000, Stefano Tine wrote:
> >
> > Dazzle 0.94
> > Tomcat 3.3
> > Ensembl 3.26.1 (but human_trace.pm and mouse_trace.pm
> > are missing/not distributed, this was downloaded a couple
> > days after 3.26.1 was released)
> >
> > Looking forward to the new package
>
> It's up now, in:
>
> http://www.biojava.org/download/ensembl-das/
>
> Grab:
>
> ensembl-das-webapp-20020214.tar.gz
>
> You should be able to use exactly the same configuration
> as with any other recent version. The only changes are:
>
> - For the ensembl bridge, schemaVersion settings of less
> that 80 are now treated as `official' versions. The only
> one current recognized is version 3. For connecting to
> older databases, old style versions in the range 80-130
> are still supported.
>
> - You can create datasource aliases, as in the example Tony
> posted earlier.
>
> > (or I will try upgrading Tomcat as last resource)
>
> I really would try getting rid of Tomcat 3.3. We've had a /lot/
> of reported problems with that container, which always seem to
> go away when users either upgrade or downgrade. I really don't
> know what's causing this (maybee some very subtle ClassLoader
> bug?), but I know it's bad news...
>
> Good luck!
>
> Thomas.
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