[DAS] Additional help with setting up LDAS
Fri, 7 Dec 2001 17:37:14 -0500
Sorry, it's not your fault. I see there's a bug in the code that passes the
configuration password information to the database. I'm fixing it now and
will send you a new version in a few minutes. The updated version will also
be available by CVS.
On Friday 07 December 2001 15:45, Benjamin L. King wrote:
> When I do an 'entry_points' query with my test database, dicty, I get the
> following output returned to my web browser:
> Date: Fri, 07 Dec 2001 20:35:28 GMT
> Server: Apache/1.3.22 (Unix)
> x-das-status: 500
> x-das-version: DAS/1.00
> Connection: close
> Content-Type: text/plain; charset=ISO-8859-1
> Could not open database
> I'm able to use ldasdump.pl to query my test database. I'm also able to
> log in as the user 'nobody' and do a query using mysql.
> Does anyone have any suggestions on how to debug my installation?
> Here is the DATA SOURCE portion of my dicty.conf file that is in the
> das.conf subdirectory of the Apache conf directory.
> [DATA SOURCE]
> description = Test annotations
> adaptor = dbi::mysqlopt
> mapmaster = http://crick.informatics.jax.org:8080/cgi-bin/das/dicty
> database = dbi:mysql:database=dicty;host=localhost
> fasta_files =
> user = nobody
> passwd = xxxxxxx
> Thank you!
> - Ben
> Benjamin L. King
> Mouse Genome Informatics
> The Jackson Laboratory
> Bar Harbor, ME 04609 USA
> DAS mailing list
Lincoln D. Stein Cold Spring Harbor Laboratory
firstname.lastname@example.org Cold Spring Harbor, NY
NOW HIRING BIOINFORMATICS POSTDOCTORAL FELLOWS AND PROGRAMMERS.
PLEASE WRITE FOR DETAILS.