[BioSQL-l] BioSQL- connectivity

[Roy Chaudhuri]

Hi Sanjay,

Please keep replies on the mailing list (reply to all), that way others 
can also respond.

I don't think there is a tutorial for BioSQL using BioPerl. There are 
some links to useful documentation on the BioSQL wiki:
http://biosql.org/wiki/Main_Page

The BioSQL INSTALL file provides instructions for getting your database 
set up and loading sequences into it:
http://code.open-bio.org/svnweb/index.cgi/biosql/view/biosql-schema/trunk/INSTALL

There are some examples of retrieving a sequence from a BioSQL database 
using BioPerl in Hilmar's Persistent BioPerl presentation:
http://precedings.nature.com/documents/1233/version/1

Try loading your BioSQL database with some sequences, then retrieving 
them using code based on the examples in the presentation. If you run 
into problems e-mail the mailing list with a full description of what 
you were trying to do (including the code you were using, and any error 
messages that were reported), and I'm sure someone will be able to help.

Roy.

Sanjay Harke wrote:
> Dear sir,
> 
> Do  you have any basic tutorial on Biosql-Bioperl ?
> If available kindly send me it.
> 
> sanjay