[BioSQL-l] DBXRef
Hilmar Lapp
hlapp@gnf.org
Thu, 12 Sep 2002 13:02:50 -0700
I propose to convert the implicit foreign keys to bioentries
captured as DBXref into explicit foreign keys to Bioentry.
This enables integrity checking by the database, fast and simple
joins, and provides for easy annotation/decoration of DBXrefs
(because they'd become no less annotatable as any other Bioentry).
At the same time, this change would give rise to a Bioentry-Bioentry
association table, which we need anyway to represent relationships
between bioentries, one of the central concepts of the database
we're building here. These associations would be typed.
To extend this, eventually these relationships will also need to
reference evidence. If anyone has thoughts on this please share.
This is not our most immediate problem though.
-hilmar
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Hilmar Lapp email: lapp at gnf.org
GNF, San Diego, Ca. 92121 phone: +1-858-812-1757
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