chmille4 at gmail.com
Wed Jan 12 18:37:19 UTC 2011
Quick update on the bio-assembly plugin.
Francesco has added support for CAF files. According to his preliminary
tests it can handle a 27k contig 454 file in about a minute. He also
improved the performance overall so now the ace parser can process a 70 mb
file in about 10 seconds. Nice work!
If there are any requests for parsers or functionality, let us know.
source code: https://github.com/chmille4/bioruby-assembly
More information about the BioRuby