[BioRuby-cvs] bioruby/lib/bio/io ensembl.rb,1.8,1.9

[Mitsuteru C. Nakao]

Update of /home/repository/bioruby/bioruby/lib/bio/io
In directory dev.open-bio.org:/tmp/cvs-serv10014/lib/bio/io

Modified Files:
	ensembl.rb 
Log Message:
* Added tests.


Index: ensembl.rb
===================================================================
RCS file: /home/repository/bioruby/bioruby/lib/bio/io/ensembl.rb,v
retrieving revision 1.8
retrieving revision 1.9
diff -C2 -d -r1.8 -r1.9
*** ensembl.rb	29 Mar 2007 05:50:43 -0000	1.8
--- ensembl.rb	29 Mar 2007 08:00:04 -0000	1.9
***************
*** 110,113 ****
--- 110,120 ----
    #                                 'genscan', 'variation', 'gene'])
    #   human.exportview(1, 1149206, 1150000, ['variation', 'gene'])
+   #   
+   # Feature in TAB
+   #   human.exportview(:seq_region_name => 1, 
+   #                    :anchor1 => 1149206, :anchor2 => 1150000, 
+   #                    :options => ['similarity', 'repeat', 
+   #                                 'genscan', 'variation', 'gene'],
+   #                    :format => 'tab')
    #
    # == Arguments
***************
*** 164,169 ****
          :anchor2 => args[2],
        }
!       if args.size >= 4 
          options.update({:format => 'gff', :options => args[3]}) 
        end
      end
--- 171,184 ----
          :anchor2 => args[2],
        }
! 
!       case args[3]
!       when Array
          options.update({:format => 'gff', :options => args[3]}) 
+       when Hash
+         options.update(args[3])
+       end
+ 
+       if aqrgs[4].class == Hash
+         options.update(args[4])
        end
      end