[BioRuby-cvs] bioruby/test/unit/bio/sequence test_aa.rb,1.3,1.4

Katayama Toshiaki k at dev.open-bio.org
Sat Apr 14 05:09:25 UTC 2007


Update of /home/repository/bioruby/bioruby/test/unit/bio/sequence
In directory dev.open-bio.org:/tmp/cvs-serv5963/test/unit/bio/sequence

Modified Files:
	test_aa.rb 
Log Message:
* follow the change in to_re method that the regexp includes ambiguous amino acid itself


Index: test_aa.rb
===================================================================
RCS file: /home/repository/bioruby/bioruby/test/unit/bio/sequence/test_aa.rb,v
retrieving revision 1.3
retrieving revision 1.4
diff -C2 -d -r1.3 -r1.4
*** test_aa.rb	5 Apr 2007 23:35:44 -0000	1.3
--- test_aa.rb	14 Apr 2007 05:09:23 -0000	1.4
***************
*** 68,72 ****
        assert_equal(re, @obj.to_re)
        @obj[1, 1] = 'B'
!       re = /R[DN]LEHTFVFLRNFSLMLLRY/
        assert_equal(re, @obj.to_re)
      end
--- 68,72 ----
        assert_equal(re, @obj.to_re)
        @obj[1, 1] = 'B'
!       re = /R[DNB]LEHTFVFLRNFSLMLLRY/
        assert_equal(re, @obj.to_re)
      end




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