[BioRuby-cvs] bioruby/lib/bio/db fasta.rb,1.24,1.25
Naohisa Goto
ngoto at pub.open-bio.org
Wed Feb 22 08:44:49 UTC 2006
Update of /home/repository/bioruby/bioruby/lib/bio/db
In directory pub.open-bio.org:/tmp/cvs-serv365/lib/bio/db
Modified Files:
fasta.rb
Log Message:
added a new constant DELIMITER_OVERRUN for Bio::FlatFile.
Index: fasta.rb
===================================================================
RCS file: /home/repository/bioruby/bioruby/lib/bio/db/fasta.rb,v
retrieving revision 1.24
retrieving revision 1.25
diff -C2 -d -r1.24 -r1.25
*** fasta.rb 14 Feb 2006 13:42:40 -0000 1.24
--- fasta.rb 22 Feb 2006 08:44:46 -0000 1.25
***************
*** 139,142 ****
--- 139,145 ----
DELIMITER = RS = "\n>"
+ # (Integer) excess read size included in DELIMITER.
+ DELIMITER_OVERRUN = 1 # '>'
+
# The comment line of the FASTA formatted data.
attr_accessor :definition
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