[BioRuby-cvs] bioruby/test/unit/bio/util test_contingency_table.rb, 1.1, 1.2

Mitsuteru C. Nakao nakao at pub.open-bio.org
Wed Nov 23 06:55:19 EST 2005


Update of /home/repository/bioruby/bioruby/test/unit/bio/util
In directory pub.open-bio.org:/tmp/cvs-serv16668/test/unit/bio/util

Modified Files:
	test_contingency_table.rb 
Log Message:
* Fixed the order of arguments of assert_equal.


Index: test_contingency_table.rb
===================================================================
RCS file: /home/repository/bioruby/bioruby/test/unit/bio/util/test_contingency_table.rb,v
retrieving revision 1.1
retrieving revision 1.2
diff -C2 -d -r1.1 -r1.2
*** test_contingency_table.rb	15 Nov 2005 16:42:54 -0000	1.1
--- test_contingency_table.rb	23 Nov 2005 11:55:17 -0000	1.2
***************
*** 84,96 ****
  
  
!       #assert_equal(results[0][2], 2.4)
!       assert_equal(results[0][2].to_s, '2.4')
!       assert_equal(results[0][3].to_s, '0.534522483824849')
  
!       assert_equal(results[5][2].to_s, '12.0')
!       assert_equal(results[5][3].to_s, '0.816496580927726')
  
!       assert_equal(results[9][2].to_s, '2.4')
!       assert_equal(results[9][3].to_s, '0.534522483824849')
  
        ctable = Bio::ContingencyTable.new
--- 84,96 ----
  
  
!       #assert_equal(2.4, results[0][2])
!       assert_equal('2.4', results[0][2].to_s)
!       assert_equal('0.534522483824849', results[0][3].to_s)
  
!       assert_equal('12.0', results[5][2].to_s)
!       assert_equal('0.816496580927726', results[5][3].to_s)
  
!       assert_equal('2.4', results[9][2].to_s)
!       assert_equal('0.534522483824849', results[9][3].to_s)
  
        ctable = Bio::ContingencyTable.new
***************
*** 98,104 ****
        ctable.table['a']['g'] = 2
        ctable.table['g']['t'] = 3
!       assert_equal(ctable.chi_square.to_s, '1.28571428571429')
!       assert_equal(ctable.row_sum_all, ctable.column_sum_all)
!       assert_equal(ctable.table_sum_all, ctable.column_sum_all)
      end
  
--- 98,104 ----
        ctable.table['a']['g'] = 2
        ctable.table['g']['t'] = 3
!       assert_equal('1.28571428571429', ctable.chi_square.to_s)
!       assert_equal(ctable.column_sum_all, ctable.row_sum_all)
!       assert_equal(ctable.column_sum_all, ctable.table_sum_all)
      end
  



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