[BioRuby-cvs] bioruby/test/unit/bio/shell/plugin test_seq.rb, 1.1, 1.2

Mitsuteru C. Nakao nakao at pub.open-bio.org
Wed Nov 23 06:40:47 EST 2005


Update of /home/repository/bioruby/bioruby/test/unit/bio/shell/plugin
In directory pub.open-bio.org:/tmp/cvs-serv16568/test/unit/bio/shell/plugin

Modified Files:
	test_seq.rb 
Log Message:
* Fixed the order of argument of assert_equal.


Index: test_seq.rb
===================================================================
RCS file: /home/repository/bioruby/bioruby/test/unit/bio/shell/plugin/test_seq.rb,v
retrieving revision 1.1
retrieving revision 1.2
diff -C2 -d -r1.1 -r1.2
*** test_seq.rb	28 Oct 2005 02:03:34 -0000	1.1
--- test_seq.rb	23 Nov 2005 11:40:45 -0000	1.2
***************
*** 35,58 ****
      def test_naseq
        str = 'ACGT'
!       assert_equal(naseq(str).class, Bio::Sequence::NA)
!       assert_equal(naseq(str), Bio::Sequence::NA.new(str))
!       assert_equal(naseq(str), 'acgt')
      end
  
      def test_aaseq
        str = 'WD'
!       assert_equal(aaseq(str).class, Bio::Sequence::AA)
!       assert_equal(aaseq(str), Bio::Sequence::AA.new('WD'))
!       assert_equal(aaseq(str), 'WD')
      end
  
      def test_revseq
        str = 'acgta'
!       assert_equal(revseq(str), 'tacgt')
      end
  
      def test_translate
        str = 'ATGATG'
!       assert_equal(translate(str), Bio::Sequence::AA.new('MM'))
      end
  
--- 35,58 ----
      def test_naseq
        str = 'ACGT'
!       assert_equal(Bio::Sequence::NA, naseq(str).class)
!       assert_equal(Bio::Sequence::NA.new(str), naseq(str))
!       assert_equal('acgt', naseq(str))
      end
  
      def test_aaseq
        str = 'WD'
!       assert_equal(Bio::Sequence::AA, aaseq(str).class)
!       assert_equal(Bio::Sequence::AA.new('WD'), aaseq(str))
!       assert_equal('WD', aaseq(str))
      end
  
      def test_revseq
        str = 'acgta'
!       assert_equal('tacgt', revseq(str))
      end
  
      def test_translate
        str = 'ATGATG'
!       assert_equal(Bio::Sequence::AA.new('MM'), translate(str))
      end
  
***************
*** 60,64 ****
        str = 'ACGT'
        output = ''
!       assert_equal(seq_report(str), output)
      end
  
--- 60,64 ----
        str = 'ACGT'
        output = ''
!       assert_equal(output, seq_report(str))
      end
  
***************
*** 67,71 ****
        str = 'WD'
        output = ''
!       assert_equal(seq_report(str), output)
      end
  
--- 67,71 ----
        str = 'WD'
        output = ''
!       assert_equal(output, seq_report(str))
      end
  
***************
*** 89,93 ****
  //
  END
!       assert_equal(na_report(naseq), output)
      end
  
--- 89,93 ----
  //
  END
!       assert_equal(output, na_report(naseq))
      end
  
***************
*** 102,106 ****
  //
  END
!       assert_equal(aa_report(aaseq), output)
      end
  
--- 102,106 ----
  //
  END
!       assert_equal(output, aa_report(aaseq))
      end
  
***************
*** 125,129 ****
       at
  END
!       assert_equal(double_helix(seq), output)
      end
  
--- 125,129 ----
       at
  END
!       assert_equal(output, doublehelix(seq))
      end
  



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