[BioRuby-cvs] bioruby/lib/bio/shell/plugin obda.rb,1.1,1.2

[Katayama Toshiaki]

Update of /home/repository/bioruby/bioruby/lib/bio/shell/plugin
In directory pub.open-bio.org:/tmp/cvs-serv30510/lib/bio/shell/plugin

Modified Files:
	obda.rb 
Log Message:
* converted to RDoc
* changed to private method


Index: obda.rb
===================================================================
RCS file: /home/repository/bioruby/bioruby/lib/bio/shell/plugin/obda.rb,v
retrieving revision 1.1
retrieving revision 1.2
diff -C2 -d -r1.1 -r1.2
*** obda.rb	23 Sep 2005 13:57:08 -0000	1.1
--- obda.rb	5 Nov 2005 09:06:49 -0000	1.2
***************
*** 1,6 ****
  #
! #  bio/shell/plugin/obda.rb - plugin for OBDA
  #
! #   Copyright (C) 2005 KATAYAMA Toshiaki <k at bioruby.org>
  #
  #  This library is free software; you can redistribute it and/or
--- 1,12 ----
  #
! # = bio/shell/plugin/obda.rb - plugin for OBDA
  #
! # Copyright::	Copyright (C) 2005
! #		Toshiaki Katayama <k at bioruby.org>
! # Lisence::	LGPL
! #
! # $Id$
! #
! #--
  #
  #  This library is free software; you can redistribute it and/or
***************
*** 18,22 ****
  #  Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307  USA
  #
! #  $Id$
  #
  
--- 24,28 ----
  #  Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307  USA
  #
! #++
  #
  
***************
*** 25,34 ****
  module Bio::Shell
  
!   def bioregistry
!     @obda = Bio::Registry.new
    end
  
!   def getentry(dbname, entry_id)
!     bioregistry unless @obda
      db = @obda.get_database(dbname)
      entry = db.get_by_id(entry_id)
--- 31,44 ----
  module Bio::Shell
  
!   private
! 
!   def setup_obda
!     unless @obda
!       @obda = Bio::Registry.new
!     end
    end
  
!   def obda_get_entry(dbname, entry_id)
!     setup_obda
      db = @obda.get_database(dbname)
      entry = db.get_by_id(entry_id)