[BioRuby-cvs] bioruby/lib bio.rb,1.56,1.57

[Katayama Toshiaki]

Update of /home/repository/bioruby/bioruby/lib
In directory pub.open-bio.org:/tmp/cvs-serv26577/lib

Modified Files:
	bio.rb 
Log Message:
* converted to RDoc
* added bio/db/kegg/kgml
* changed kegg/microarray to kegg/expression


Index: bio.rb
===================================================================
RCS file: /home/repository/bioruby/bioruby/lib/bio.rb,v
retrieving revision 1.56
retrieving revision 1.57
diff -C2 -d -r1.56 -r1.57
*** bio.rb	23 Oct 2005 15:34:30 -0000	1.56
--- bio.rb	4 Nov 2005 17:34:42 -0000	1.57
***************
*** 1,6 ****
  #
! # bio.rb - Loading all BioRuby modules
  #
! #   Copyright (C) 2001-2005 KATAYAMA Toshiaki <k at bioruby.org>
  #
  #  This library is free software; you can redistribute it and/or
--- 1,12 ----
  #
! # = bio.rb - Loading all BioRuby modules
  #
! # Copyright::	Copyright (C) 2001-2005
! #		Toshiaki Katayama <k at bioruby.org>
! # License::	LGPL
! #
! # $Id$
! #
! #--
  #
  #  This library is free software; you can redistribute it and/or
***************
*** 18,22 ****
  #  Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307  USA
  #
! #  $Id$
  #
  
--- 24,28 ----
  #  Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307  USA
  #
! #++
  #
  
***************
*** 40,44 ****
  
    autoload :Feature,        'bio/feature'
!   autoload :Features,       'bio/feature'       # to_gff
  
    ## References/Reference
--- 46,50 ----
  
    autoload :Feature,        'bio/feature'
!   autoload :Features,       'bio/feature'
  
    ## References/Reference
***************
*** 115,122 ****
      autoload :BRITE,        'bio/db/kegg/brite'
      autoload :CELL,         'bio/db/kegg/cell'
!     autoload :Microarray,   'bio/db/kegg/microarray'
!     autoload :Microarrays,  'bio/db/kegg/microarray'
      autoload :Keggtab,      'bio/db/kegg/keggtab'
      autoload :KO,           'bio/db/kegg/ko'
    end
  
--- 121,128 ----
      autoload :BRITE,        'bio/db/kegg/brite'
      autoload :CELL,         'bio/db/kegg/cell'
!     autoload :EXPRESSION,   'bio/db/kegg/expression'
      autoload :Keggtab,      'bio/db/kegg/keggtab'
      autoload :KO,           'bio/db/kegg/ko'
+     autoload :KGML,         'bio/db/kegg/kgml'
    end