[BioRuby-cvs] bioruby/lib/bio/io flatfile.rb,1.40,1.41

Naohisa Goto ngoto at pub.open-bio.org
Tue Nov 1 10:34:47 EST 2005


Update of /home/repository/bioruby/bioruby/lib/bio/io
In directory pub.open-bio.org:/tmp/cvs-serv8155

Modified Files:
	flatfile.rb 
Log Message:
Format autodetection of EMBL data failed after EMBL release 76 (Sep. 2003).
( http://www.ebi.ac.uk/embl/Documentation/Release_notes/relnotes75/relnotes.html#2.3 )


Index: flatfile.rb
===================================================================
RCS file: /home/repository/bioruby/bioruby/lib/bio/io/flatfile.rb,v
retrieving revision 1.40
retrieving revision 1.41
diff -C2 -d -r1.40 -r1.41
*** flatfile.rb	1 Nov 2005 05:32:24 -0000	1.40
--- flatfile.rb	1 Nov 2005 15:34:45 -0000	1.41
***************
*** 390,394 ****
          Bio::MEDLINE
          
!       when /^ID   .+\; *(DNA|RNA|XXX)\;/
          Bio::EMBL
        when /^ID   .+\; *PRT\;/
--- 390,394 ----
          Bio::MEDLINE
          
!       when /^ID   .+\; .*(DNA|RNA|XXX)\;/
          Bio::EMBL
        when /^ID   .+\; *PRT\;/



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