[BioRuby-cvs] bioruby/doc Tutorial.rd,NONE,1.1

[Naohisa Goto]

Update of /home/repository/bioruby/bioruby/doc
In directory pub.open-bio.org:/tmp/cvs-serv31988

Added Files:
	Tutorial.rd 
Log Message:
Quick translation of Tutorial.rd.ja into English.


--- NEW FILE: Tutorial.rd ---
=begin

  $Id: Tutorial.rd,v 1.1 2005/08/31 12:35:41 ngoto Exp $

  Copyright (C) 2001-2003 KATAYAMA Toshiaki <k at bioruby.org>

= How to use BioRuby

== Manipulating nucleic / amino acid sequences (Bio::Sequence class)

For simple example, by using a short DNA seuquence "atgcatgcaaaa",
we are now converting into complemental strand, splicing subsequence,
calculating nucleic acid compositions, translating to amino acid sequence,
calculating molecular weight, and so on. About translation to
amino acid sequences, you can specify frame where you want to start
translation from and condon table ID defined in codontable.rb.


    #!/usr/bin/env ruby
[...978 lines suppressed...]

to be written...


= KEGG API

Please refer to KEGG_API.rd.ja (TRANSLATOR'S NOTE: English version: ((<URL:http://www.genome.jp/kegg/soap/doc/keggapi_manual.html>)) ) and

  * ((<URL:http://www.genome.jp/kegg/soap/>))

= APPENDIX

== Installing required external library

to be written...

(TRANSLATOR'S NOTE: No additional libraries are needed with Ruby 1.8.1 and later.)

=end