[Biopython] dblp searches

Iddo Friedberg idoerg at gmail.com
Fri Mar 4 11:12:30 EST 2022


Well, we have a full interface to Pubmed, so I thought a DBLP search (which
catalogs many bioinformatics papers)  might nicely complement that.

On Fri, Mar 4, 2022 at 10:09 AM Nathan McCorkle <nmz787 at gmail.com> wrote:

> I'm not sure how DBLP is applicable to BioPython...
>
> On Wed, Feb 9, 2022 at 6:16 AM Peter Cock <p.j.a.cock at googlemail.com>
> wrote:
>
>> Hi Iddo,
>>
>> 1) I don't know.
>> 2) I am not a lawyer, but I think that would be OK if it is just plain
>> MIT license. i.e.  incorporate the file with its own licensing header and
>> copyright statement. I suspect we have/had precedent already, but a quick
>> search on GitHub didn't find it.
>>
>> Peter
>>
>> On Tue, Feb 8, 2022 at 10:55 PM Iddo Friedberg <idoerg at gmail.com> wrote:
>>
>>> Dear all,
>>>
>>> Not sure how much interest this has, but there is a Python wrapper for
>>> the dblp api. I forked it, added functionality, and converted to Python 3.
>>> The original github repository does not have a license, but the steup.py
>>> lists MIT as the license.
>>>
>>> 1) Is there any interest in incorporating this into Biopython? It is
>>> essentially complementary to the pubmed search tool, for publications not
>>> indexed in Pubmed but indexed in DBLP.
>>>
>>> 2) If so, do we have a licensing issue?
>>>
>>> The DBLP API: https://dblp.org/faq/How+to+use+the+dblp+search+API.html
>>>
>>> Code (my fork with the added stuff):
>>> https://github.com/idoerg/dblp-python
>>>
>>> Original repo: https://github.com/scholrly/dblp-python
>>>
>>> Iddo
>>>
>>> --
>>> Iddo Friedberg
>>> http://iddo-friedberg.net/contact.html
>>> ++++++++++[>+++>++++++>++++++++>++++++++++>+++++++++++<<<<<-]>>>>++++.>
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>>> .>-.<<<<--.>>>++.>+++.<+++.----.-.<++++++++++++++++++.>+.>.<++.<<<+.>>
>>> >>----.<--.>++++++.<<<<------------------------------------.
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>
>
> --
> -Nathan
>


-- 
Iddo Friedberg
http://iddo-friedberg.net/contact.html
++++++++++[>+++>++++++>++++++++>++++++++++>+++++++++++<<<<<-]>>>>++++.>
++++++..----.<<<<++++++++++++++++++++++++++++.-----------..>>>+.-----.
.>-.<<<<--.>>>++.>+++.<+++.----.-.<++++++++++++++++++.>+.>.<++.<<<+.>>
>>----.<--.>++++++.<<<<------------------------------------.
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