[Biopython] Dropping Python 3.5 support?

Sean Brimer skbrimer at gmail.com
Mon Nov 18 16:12:03 UTC 2019


I do not seen a issue with it. The developer guide has 3.5 and 3.6 only
receiving security updates currently.

On Mon, Nov 18, 2019, 9:16 AM Peter Cock <p.j.a.cock at googlemail.com> wrote:

> If you mean we should aim to release Biopython 1.76 as the final release
> with
> Python 2.7 support in mid/late December 2019 (rather than early January
> 2020
> which is what I was thinking), I wouldn't object.
>
> Any thoughts on Python 3.5 support?
>
> Peter
>
> On Mon, Nov 18, 2019 at 2:59 PM Michiel de Hoon <mjldehoon at yahoo.com>
> wrote:
> >
> > >To start the conversation going, I would like to suggest we drop Python
> 3.5
> > support at the same time that we drop Python 2.7 (after our first
> release in
> > 2020).
> >
> > Let's drop Python 2.7 already in our first release in 2020, so that all
> releases from 2020 are Python3 only.
> >
> > Best,
> > -Michiel
> >
> >
> > On Monday, November 18, 2019, 10:33:55 PM GMT+9, Peter Cock <
> p.j.a.cock at googlemail.com> wrote:
> >
> >
> > Dear Biopythoneers,
> >
> > We have already announced that we are dropping Python 2.7 support in
> > early 2020, which will leave us supporting Python 3.5, 3.6, 3.7 and 3.8.
> >
> > Both Python 3.5 and 3.6 are no longer getting bug fixes, only security
> > fixes though to September 2020 and December 2021 respectively
> > (based on a five year life cycle):
> >
> > https://devguide.python.org/#status-of-python-branches
> >
> > As usual, the motivation is both reducing the number of combinations we
> > must test on, and being able to take advantage of language improvements.
> > In this case we would be able to assume sorted dictionaries (a language
> > feature guaranteed in Python 3.7 onwards, but actually implemented in
> > C Python 3.6 and PyPy so effectively available in Python 3.6 onwards).
> >
> > In similar past discussion the only real obstacle to dropping support for
> > older Python versions has been when a widely used Linux system had
> > it as the default system Python - although nowadays with conda etc it
> > is very easy to ignore that in favour of a user-specific Python setup.
> >
> > Are any of our mailing list subscribers still using Python 3.5? If so,
> > would having to update be a major hurdle?
> >
> > To start the conversation going, I would like to suggest we drop Python
> 3.5
> > support at the same time that we drop Python 2.7 (after our first
> release in
> > 2020).
> >
> > Peter
> > _______________________________________________
> > Biopython mailing list  -  Biopython at mailman.open-bio.org
> > https://mailman.open-bio.org/mailman/listinfo/biopython
> _______________________________________________
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>
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